Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
EDM44902.1Sodium/calcium exchanger; COG0530 Ca2+/Na+ antiporter. (317 aa)    
Predicted Functional Partners:
EDM43373.1
Sugar phosphate isomerase, KpsF/GutQ family protein; COG0794 Predicted sugar phosphate isomerase involved in capsule formation; Belongs to the SIS family. GutQ/KpsF subfamily.
    
 0.822
EDM43452.1
Putative lipopolysaccharide biosynthesis-related protein; COG1778 Low specificity phosphatase (HAD superfamily).
 
  
 0.657
rpsD
30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
   
  0.581
EDM45309.1
Sodium/hydrogen exchanger; COG0025 NhaP-type Na+/H+ and K+/H+ antiporters; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
 
 
 
 0.551
EDM44903.1
Putative antibiotic resistance-related regulatory protein; COG3682 Predicted transcriptional regulator.
       0.532
EDM44904.1
Hypothetical protein; COG4219 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component.
       0.517
EDM44905.1
Adenine phosphoribosyltransferase.
       0.517
EDM44901.1
Glutamine synthetase; COG3968 Uncharacterized protein related to glutamine synthetase.
       0.431
EDM43526.1
COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
   0.418
EDM44219.1
3-oxoacyl-(acyl-carrier protein) reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
   0.418
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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