Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
Experiments
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[Homology]
Score
EDM44926.1COG1629 Outer membrane receptor proteins, mostly Fe transport. (804 aa)    
Predicted Functional Partners:
EDM44925.1
Hypothetical protein; COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases.
 
     0.943
EDM44927.1
Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins.
 
     0.703
EDM44145.1
Hypothetical protein.
  
     0.695
guaA
Bifunctional GMP synthase/glutamine amidotransferase protein; Catalyzes the synthesis of GMP from XMP.
     
  0.601
EDM43345.1
Probable arsenate reductase; COG0394 Protein-tyrosine-phosphatase.
  
 
   0.489
EDM43540.1
Hypothetical protein; COG0711 F0F1-type ATP synthase, subunit b.
  
     0.471
EDM45062.1
Hypothetical protein; COG2931 RTX toxins and related Ca2+-binding proteins.
   
  0.469
EDM45683.1
Hypothetical protein.
   
  0.469
EDM43558.1
TonB; COG0810 Periplasmic protein TonB, links inner and outer membranes.
   
  0.469
EDM43393.1
Putative transcription regulator; COG0735 Fe2+/Zn2+ uptake regulation proteins; Belongs to the Fur family.
  
     0.439
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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