STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM44940.1Hypothetical protein; COG0474 Cation transport ATPase. (664 aa)    
Predicted Functional Partners:
EDM44943.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
 
     0.862
EDM44941.1
Hypothetical protein.
 
     0.806
EDM44939.1
Hypothetical protein.
       0.727
EDM44942.1
Hypothetical protein.
       0.649
EDM44234.1
Hypothetical protein; COG0591 Na+/proline symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
     0.534
thiC
Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family.
     
  0.513
EDM44235.1
COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases.
  
     0.433
EDM44232.1
Putative outer membrane protein, probably involved in nutrient binding; COG4771 Outer membrane receptor for ferrienterochelin and colicins.
  
     0.412
EDM44233.1
Hypothetical protein.
  
     0.407
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.