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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM44948.1Lipase/acylhydrolase family protein; COG2755 Lysophospholipase L1 and related esterases. (237 aa)    
Predicted Functional Partners:
EDM43315.1
CheA Signal Transduction Histidine Kinases (STHK); COG3210 Large exoproteins involved in heme utilization or adhesion.
   
 0.797
EDM43605.1
Hypothetical protein.
   
 0.797
EDM43610.1
Putative phage tail protein.
   
 0.797
EDM44652.1
Probable extracellular nuclease; COG3210 Large exoproteins involved in heme utilization or adhesion.
   
 0.797
EDM44647.1
COG1250 3-hydroxyacyl-CoA dehydrogenase.
     
 0.763
EDM43086.1
B-glycosidase, glycoside hydrolase family 3 protein; COG1472 Beta-glucosidase-related glycosidases.
 
  
 0.682
EDM43878.1
beta-N-acetylglucosaminidase; COG1472 Beta-glucosidase-related glycosidases.
 
  
 0.680
EDM44295.1
Lipase (putative secreted protein); COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases.
     
 0.593
EDM43089.1
Probable oxidoreductase; COG0277 FAD/FMN-containing dehydrogenases.
    
  0.572
EDM44949.1
Hypothetical protein; COG0708 Exonuclease III.
       0.488
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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