STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM44954.1Hypothetical protein. (225 aa)    
Predicted Functional Partners:
EDM44952.1
Hypothetical protein; COG0286 Type I restriction-modification system methyltransferase subunit.
       0.773
EDM44953.1
Type I restriction-modification system specificity determinant protein; COG0732 Restriction endonuclease S subunits.
       0.773
EDM44951.1
COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases.
       0.768
EDM44956.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
       0.490
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.