STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM44972.1Hypothetical protein. (128 aa)    
Predicted Functional Partners:
EDM45679.1
COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3.
 
     0.708
EDM43672.1
Hypothetical protein; COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase.
  
     0.664
EDM45678.1
Hypothetical protein.
 
     0.617
EDM43792.1
COG3239 Fatty acid desaturase.
  
     0.613
EDM45612.1
Hypothetical protein.
  
     0.609
EDM44274.1
Heme/copper-type cytochrome/quinol oxidase, subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
     0.607
EDM44374.1
Hypothetical protein.
  
     0.536
EDM44971.1
COG0488 ATPase components of ABC transporters with duplicated ATPase domains.
       0.517
EDM44218.1
COG3091 Uncharacterized protein conserved in bacteria.
  
     0.490
EDM43024.1
COG0308 Aminopeptidase N.
  
     0.486
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.