STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM44992.1Acriflavin resistance protein AcrE, putative; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (343 aa)    
Predicted Functional Partners:
EDM44993.1
Outer membrane efflux family protein, putative; COG1538 Outer membrane protein.
 
  0.984
EDM44991.1
Transporter, AcrB/D/F family protein; COG0841 Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.962
EDM45595.1
COG1538 Outer membrane protein.
  
  0.882
EDM44968.1
COG1538 Outer membrane protein.
  
  0.865
EDM43392.1
COG1538 Outer membrane protein.
   
  0.859
EDM44919.1
COG1538 Outer membrane protein.
   
  0.855
EDM44990.1
Hypothetical protein.
 
     0.854
EDM45665.1
COG1538 Outer membrane protein.
   
  0.827
EDM44138.1
Putative outer membrane lipoprotein precursor; COG1538 Outer membrane protein.
   
  0.827
EDM45594.1
Cation efflux system protein/acriflavin resistance protein B family; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
 
0.820
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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