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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM45003.1COG2365 Protein tyrosine/serine phosphatase. (186 aa)    
Predicted Functional Partners:
EDM44387.1
Regulatory P domain of the subtilisin-like proprotein convertases and other protease.
   
 
 0.997
EDM45002.1
TonB dependent receptor, putative; COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
     0.842
EDM42911.1
Ferredoxin 2 with 4Fe-4S binding domain; COG1145 Ferredoxin.
    
   0.808
EDM45257.1
Ferredoxin; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
    
   0.790
EDM43586.1
phenylacetate-CoA oxygenase, PaaK subunit; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
    
   0.790
EDM43679.1
COG0633 Ferredoxin.
    
   0.790
EDM44372.1
Sulfate transporter/antisigma-factor antagonist STAS; COG0659 Sulfate permease and related transporters (MFS superfamily).
    
   0.782
EDM44061.1
COG0659 Sulfate permease and related transporters (MFS superfamily).
    
   0.782
EDM44600.1
Possible integral membrane sulfate transportor; COG0659 Sulfate permease and related transporters (MFS superfamily).
    
   0.782
guaA
Bifunctional GMP synthase/glutamine amidotransferase protein; Catalyzes the synthesis of GMP from XMP.
    
  0.752
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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