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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM45009.1COG3752 Predicted membrane protein. (154 aa)    
Predicted Functional Partners:
EDM45535.1
Hypothetical protein; COG1100 GTPase SAR1 and related small G proteins.
    
 0.763
EDM43089.1
Probable oxidoreductase; COG0277 FAD/FMN-containing dehydrogenases.
    
  0.607
EDM44582.1
Hypothetical protein; COG0419 ATPase involved in DNA repair.
    
  0.593
EDM44269.1
COG2124 Cytochrome P450.
    
  0.584
EDM45557.1
Bifunctional protein: riboflavin kinase; COG0196 FAD synthase; Belongs to the ribF family.
     
 0.561
EDM45010.1
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
       0.557
EDM45006.1
Rhodanese-like protein; COG0491 Zn-dependent hydrolases, including glyoxylases.
    
  0.528
EDM44240.1
Hypothetical protein; COG3000 Sterol desaturase.
  
  
  0.494
EDM44636.1
Monooxygenase family protein; COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain.
  
  
  0.482
EDM45008.1
Antioxidant, AhpC/TSA family protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
       0.480
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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