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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM45012.1COG2149 Predicted membrane protein. (82 aa)    
Predicted Functional Partners:
EDM45011.1
Hypothetical protein.
       0.773
EDM45013.1
Heavy metal transport/detoxification protein; COG2608 Copper chaperone.
       0.773
EDM45014.1
Hypothetical protein; COG0607 Rhodanese-related sulfurtransferase.
       0.746
EDM44491.1
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
  
     0.552
EDM45015.1
COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
       0.459
EDM45272.1
TPR-repeat-containing protein; COG0457 FOG: TPR repeat.
  
     0.454
EDM43577.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
     0.453
EDM43477.1
COG2849 Uncharacterized protein conserved in bacteria.
  
     0.432
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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