STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM45021.1COG2217 Cation transport ATPase. (117 aa)    
Predicted Functional Partners:
EDM45022.1
COG4771 Outer membrane receptor for ferrienterochelin and colicins.
     0.988
EDM45023.1
Hypothetical protein; COG2217 Cation transport ATPase.
  
 0.951
EDM44669.1
COG2032 Cu/Zn superoxide dismutase.
   
 0.914
EDM43714.1
Cu(I)-translocating P-type ATPase; COG2217 Cation transport ATPase.
  
 0.859
EDM44147.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
 
  0.694
groL
Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
     
  0.677
EDM43535.1
Hypothetical protein.
  
 
  0.614
EDM42919.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
 
  0.575
EDM44932.1
Heat shock protein Hsp70; COG0443 Molecular chaperone.
     
  0.546
EDM44934.1
COG0443 Molecular chaperone; Belongs to the heat shock protein 70 family.
     
  0.546
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.