STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM45024.1Hypothetical protein. (123 aa)    
Predicted Functional Partners:
EDM45025.1
Hypothetical protein.
 
     0.694
EDM44966.1
Hypothetical protein.
  
     0.597
EDM45621.1
CHU large protein; uncharacterized.
  
     0.573
EDM45022.1
COG4771 Outer membrane receptor for ferrienterochelin and colicins.
       0.542
EDM45023.1
Hypothetical protein; COG2217 Cation transport ATPase.
       0.542
EDM45449.1
Transcriptional regulator; COG0457 FOG: TPR repeat.
  
     0.519
EDM44682.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
     0.480
EDM44684.1
COG4206 Outer membrane cobalamin receptor protein.
  
     0.477
EDM45021.1
COG2217 Cation transport ATPase.
       0.475
EDM43371.1
Hypothetical protein.
  
     0.471
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.