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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM45031.1Rod shape-determining protein; COG1077 Actin-like ATPase involved in cell morphogenesis. (342 aa)    
Predicted Functional Partners:
EDM45032.1
Putative rod shape-determining protein MreC; COG1792 Cell shape-determining protein.
 
 
 0.978
EDM45034.1
COG0768 Cell division protein FtsI/penicillin-binding protein 2.
 
 
 0.920
EDM45035.1
Rod shape-determining protein; COG0772 Bacterial cell division membrane protein; Belongs to the SEDS family.
 
 
 0.892
ftsZ
Cell division protein; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
 
 0.775
EDM43759.1
COG0768 Cell division protein FtsI/penicillin-binding protein 2.
 
 
 
 0.710
ftsA
Cell division protein A; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
 
 
 0.677
purH
Bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful).
  
    0.646
EDM45700.1
COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor).
  
   0.637
secD
Protein-export membrane protein SecD/SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
  
  
 0.617
EDM43763.1
COG0772 Bacterial cell division membrane protein; Belongs to the SEDS family.
 
 
 0.584
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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