STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM45053.1COG0760 Parvulin-like peptidyl-prolyl isomerase. (701 aa)    
Predicted Functional Partners:
EDM45057.1
TPR domain protein; COG0457 FOG: TPR repeat.
 
 
   0.702
EDM43164.1
Putative exported peptidyl-prolyl cis-trans isomerase; COG0760 Parvulin-like peptidyl-prolyl isomerase.
  
     0.699
EDM45690.1
COG4775 Outer membrane protein/protective antigen OMA87.
  
   0.675
EDM45688.1
COG2825 Outer membrane protein.
  
  
 0.674
EDM42828.1
Putative hemin receptor.
  
     0.658
EDM45058.1
Putative outer membrane protein; COG2067 Long-chain fatty acid transport protein.
 
     0.646
EDM44983.1
Hypothetical protein.
  
     0.635
EDM44761.1
Hypothetical protein; COG0296 1,4-alpha-glucan branching enzyme.
  
    0.634
EDM44287.1
Hypothetical protein; COG4208 ABC-type sulfate transport system, permease component.
  
     0.624
EDM43338.1
Hypothetical protein; COG0457 FOG: TPR repeat.
 
   0.605
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.