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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM45062.1Hypothetical protein; COG2931 RTX toxins and related Ca2+-binding proteins. (274 aa)    
Predicted Functional Partners:
EDM45063.1
Putative tansport related protein; COG0848 Biopolymer transport protein.
 
 0.938
EDM43339.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
 0.928
EDM45065.1
COG0811 Biopolymer transport proteins.
 
 0.922
EDM45607.1
MotA/TolQ/ExbB proton channel family protein; COG0811 Biopolymer transport proteins.
 
 0.864
EDM45609.1
Hypothetical protein.
 
 0.861
EDM45610.1
Hypothetical protein; COG0206 Cell division GTPase.
 
 0.819
EDM43311.1
Outer membrane protein, peptidoglycan-associated lipoprotein; COG0457 FOG: TPR repeat.
   
 
 0.808
EDM45509.1
Outer membrane protein, peptidoglycan-associated lipoprotein; COG0457 FOG: TPR repeat.
   
 
 0.808
EDM43539.1
Outer membrane protein, peptidoglycan-associated lipoprotein; COG0457 FOG: TPR repeat.
   
 
 0.808
EDM43195.1
Hypothetical protein.
  
  0.805
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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