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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM45129.1Hypothetical protein; COG4219 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component. (696 aa)    
Predicted Functional Partners:
EDM45128.1
Putative antibiotic resistance-related regulatory protein; COG3682 Predicted transcriptional regulator.
 
 
  0.981
EDM45147.1
Putative antibiotic resistance-related regulatory protein; COG3682 Predicted transcriptional regulator.
 
 
  0.909
EDM44903.1
Putative antibiotic resistance-related regulatory protein; COG3682 Predicted transcriptional regulator.
 
 
  0.908
EDM45130.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
 
     0.650
EDM44904.1
Hypothetical protein; COG4219 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component.
  
  
 
0.605
EDM45146.1
TonB; COG4219 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component.
  
  
 
0.589
EDM45127.1
COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism.
       0.509
EDM45165.1
Hypothetical protein; COG1393 Arsenate reductase and related proteins, glutaredoxin family; Belongs to the ArsC family.
  
     0.478
EDM44060.1
Hypothetical protein; COG1609 Transcriptional regulators.
  
     0.451
EDM43063.1
Hypothetical protein.
  
     0.449
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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