STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM45134.1Integral membrane protein; COG1988 Predicted membrane-bound metal-dependent hydrolases. (331 aa)    
Predicted Functional Partners:
EDM45135.1
COG0249 Mismatch repair ATPase (MutS family).
 
     0.633
EDM45139.1
Hypothetical protein.
 
     0.571
EDM45136.1
COG2315 Uncharacterized protein conserved in bacteria.
       0.544
EDM43247.1
Hypothetical protein.
  
     0.531
EDM45137.1
Hypothetical protein.
       0.480
EDM45138.1
Hypothetical protein.
       0.478
EDM45146.1
TonB; COG4219 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component.
  
     0.435
EDM43774.1
Hypothetical protein; COG0419 ATPase involved in DNA repair.
  
   
 0.422
EDM45140.1
COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases.
       0.417
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.