STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EDM45136.1COG2315 Uncharacterized protein conserved in bacteria. (118 aa)    
Predicted Functional Partners:
purL
Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
    
  0.879
EDM45204.1
Putative biotin--(acetyl-CoA carboxylase) synthetase; COG0340 Biotin-(acetyl-CoA carboxylase) ligase.
      0.841
EDM45135.1
COG0249 Mismatch repair ATPase (MutS family).
       0.788
EDM45137.1
Hypothetical protein.
       0.738
EDM45139.1
Hypothetical protein.
       0.735
EDM45138.1
Hypothetical protein.
       0.711
EDM45140.1
COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases.
       0.644
EDM45134.1
Integral membrane protein; COG1988 Predicted membrane-bound metal-dependent hydrolases.
       0.543
purD
COG0151 Phosphoribosylamine-glycine ligase; Belongs to the GARS family.
     
  0.543
folD
Bifunctional protein: methylenetetrahydrofolate dehydrogenase (NADP+); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
     
  0.542
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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