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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM45137.1Hypothetical protein. (212 aa)    
Predicted Functional Partners:
EDM45139.1
Hypothetical protein.
       0.791
EDM45138.1
Hypothetical protein.
       0.784
EDM43414.1
Hypothetical protein; COG1190 Lysyl-tRNA synthetase (class II).
  
     0.717
EDM45136.1
COG2315 Uncharacterized protein conserved in bacteria.
       0.715
EDM45135.1
COG0249 Mismatch repair ATPase (MutS family).
       0.702
EDM45140.1
COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases.
       0.682
EDM44071.1
Hypothetical protein.
  
     0.607
EDM44329.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
  
     0.558
EDM43287.1
Hypothetical protein.
  
     0.550
ppnK
Inorganic polyphosphate/ATP-NAD kinase.
  
     0.529
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.