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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM45146.1TonB; COG4219 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component. (448 aa)    
Predicted Functional Partners:
EDM45147.1
Putative antibiotic resistance-related regulatory protein; COG3682 Predicted transcriptional regulator.
 
 
  0.948
EDM44903.1
Putative antibiotic resistance-related regulatory protein; COG3682 Predicted transcriptional regulator.
 
 
  0.880
EDM45128.1
Putative antibiotic resistance-related regulatory protein; COG3682 Predicted transcriptional regulator.
 
 
  0.854
EDM45145.1
Tetratricopeptide repeat family protein; COG0457 FOG: TPR repeat.
       0.776
EDM45144.1
Hypothetical protein.
 
     0.694
EDM45129.1
Hypothetical protein; COG4219 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component.
  
  
 
0.589
EDM45135.1
COG0249 Mismatch repair ATPase (MutS family).
  
     0.572
EDM45062.1
Hypothetical protein; COG2931 RTX toxins and related Ca2+-binding proteins.
  
  
  0.555
EDM45134.1
Integral membrane protein; COG1988 Predicted membrane-bound metal-dependent hydrolases.
  
     0.435
EDM43529.1
Putative outer membrane protein, probably involved in nutrient binding.
  
     0.412
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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