STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM45146.1TonB; COG4219 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component. (448 aa)    
Predicted Functional Partners:
EDM45147.1
Putative antibiotic resistance-related regulatory protein; COG3682 Predicted transcriptional regulator.
 
 
  0.970
EDM44903.1
Putative antibiotic resistance-related regulatory protein; COG3682 Predicted transcriptional regulator.
 
 
  0.932
EDM45128.1
Putative antibiotic resistance-related regulatory protein; COG3682 Predicted transcriptional regulator.
 
 
  0.917
EDM45145.1
Tetratricopeptide repeat family protein; COG0457 FOG: TPR repeat.
       0.773
EDM45129.1
Hypothetical protein; COG4219 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component.
  
  
 
0.752
EDM45144.1
Hypothetical protein.
 
     0.694
EDM43558.1
TonB; COG0810 Periplasmic protein TonB, links inner and outer membranes.
     
  0.670
EDM45135.1
COG0249 Mismatch repair ATPase (MutS family).
  
     0.572
EDM43391.1
COG0845 Membrane-fusion protein.
     
  0.539
EDM45664.1
Membrane fusion efflux protein, putative; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
     
  0.539
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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