STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM45147.1Putative antibiotic resistance-related regulatory protein; COG3682 Predicted transcriptional regulator. (120 aa)    
Predicted Functional Partners:
EDM45146.1
TonB; COG4219 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component.
 
 
  0.970
EDM45129.1
Hypothetical protein; COG4219 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component.
 
 
  0.962
EDM44904.1
Hypothetical protein; COG4219 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component.
 
 
  0.931
EDM43558.1
TonB; COG0810 Periplasmic protein TonB, links inner and outer membranes.
 
  
  0.824
EDM44903.1
Putative antibiotic resistance-related regulatory protein; COG3682 Predicted transcriptional regulator.
     
  0.788
EDM45128.1
Putative antibiotic resistance-related regulatory protein; COG3682 Predicted transcriptional regulator.
     
  0.788
EDM45145.1
Tetratricopeptide repeat family protein; COG0457 FOG: TPR repeat.
       0.606
EDM45148.1
COG2839 Uncharacterized protein conserved in bacteria.
       0.548
pyrH
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
     
  0.499
cmk
COG0283 Cytidylate kinase.
     
  0.499
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.