STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM45150.1Twin-arginine translocation pathway signal; COG3211 Predicted phosphatase. (996 aa)    
Predicted Functional Partners:
EDM45149.1
COG4886 Leucine-rich repeat (LRR) protein.
 
     0.855
guaA
Bifunctional GMP synthase/glutamine amidotransferase protein; Catalyzes the synthesis of GMP from XMP.
   
 
  0.839
EDM45151.1
COG1858 Cytochrome c peroxidase.
 
     0.751
EDM42918.1
CHU large protein; uncharacterized.
  
     0.716
EDM45563.1
Hypothetical protein.
  
     0.700
EDM44507.1
Hypothetical secreted protein.
  
     0.656
EDM43026.1
Hypothetical protein.
  
     0.640
EDM44725.1
Hypothetical protein.
  
     0.631
EDM45497.1
Thermolysin; COG3227 Zinc metalloprotease (elastase).
  
     0.613
EDM44346.1
Hypothetical protein.
  
     0.611
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.