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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM45170.1Hypothetical protein. (214 aa)    
Predicted Functional Partners:
EDM42861.1
Hypothetical protein.
  
     0.570
EDM45561.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.495
EDM45118.1
COG3797 Uncharacterized protein conserved in bacteria.
  
     0.484
EDM45562.1
Hypothetical protein.
  
     0.433
EDM44138.1
Putative outer membrane lipoprotein precursor; COG1538 Outer membrane protein.
  
     0.431
EDM43770.1
COG2829 Outer membrane phospholipase A.
  
     0.429
EDM43014.1
COG1765 Predicted redox protein, regulator of disulfide bond formation.
  
     0.424
EDM45228.1
Hypothetical protein.
  
 
   0.419
EDM45168.1
COG1544 Ribosome-associated protein Y (PSrp-1).
  
    0.405
EDM44136.1
COG5126 Ca2+-binding protein (EF-Hand superfamily).
  
     0.400
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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