STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM45171.1Hypothetical protein; COG1196 Chromosome segregation ATPases. (305 aa)    
Predicted Functional Partners:
EDM45172.1
Hypothetical protein; COG0313 Predicted methyltransferases.
       0.773
EDM45174.1
Transcriptional regulator; COG0784 FOG: CheY-like receiver.
     
 0.551
EDM45173.1
Sensor histidine kinase; COG2202 FOG: PAS/PAC domain.
       0.544
EDM43909.1
COG3958 Transketolase, C-terminal subunit.
     
  0.493
EDM43910.1
COG3959 Transketolase, N-terminal subunit.
     
  0.493
EDM44849.1
Hypothetical protein; COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family.
  
 
  0.451
EDM44062.1
Hypothetical protein; COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family.
  
 
  0.451
EDM45175.1
COG0589 Universal stress protein UspA and related nucleotide-binding proteins.
       0.409
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.