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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM45188.1Hypothetical protein. (157 aa)    
Predicted Functional Partners:
EDM45187.1
Hypothetical protein.
 
     0.857
EDM43131.1
Hypothetical protein; COG2971 Predicted N-acetylglucosamine kinase.
  
     0.733
EDM43510.1
Hypothetical protein.
  
     0.642
EDM43731.1
Hypothetical protein; COG1694 Predicted pyrophosphatase.
  
     0.637
EDM45186.1
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
       0.614
EDM43969.1
Chloromuconate cycloisomerase; COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily.
  
     0.592
EDM43069.1
Hypothetical protein; COG0500 SAM-dependent methyltransferases.
  
     0.590
EDM43518.1
Hypothetical protein.
  
     0.558
EDM45189.1
COG0294 Dihydropteroate synthase and related enzymes.
       0.552
EDM45298.1
Hypothetical protein.
  
     0.534
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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