Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
EDM45192.1ABC transporter, ATP-binding/membrane-spanning protein; COG1132 ABC-type multidrug transport system, ATPase and permease components. (586 aa)    
Predicted Functional Partners:
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
 
     0.806
EDM43390.1
HlyB/MsbA family ABC transporter; COG1132 ABC-type multidrug transport system, ATPase and permease components.
  
 
0.753
EDM43979.1
COG1131 ABC-type multidrug transport system, ATPase component.
  
 
  0.746
EDM45380.1
Polyunsaturated fatty acid synthase PfaA; COG3321 Polyketide synthase modules and related proteins.
    
 0.720
EDM44004.1
Heat shock protein Hsp70; COG0443 Molecular chaperone; Belongs to the heat shock protein 70 family.
  
  0.717
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
  0.703
EDM45285.1
Multiple sugar-binding ABC transporter, ATP-binding protein; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components.
  
  
 
0.696
EDM44723.1
Probable ABC transporter, ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
  
 
  0.691
EDM44932.1
Heat shock protein Hsp70; COG0443 Molecular chaperone.
  
  0.676
EDM44934.1
COG0443 Molecular chaperone; Belongs to the heat shock protein 70 family.
  
  0.672
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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