STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM45215.1beta-Ig-H3/fasciclin; COG2335 Secreted and surface protein containing fasciclin-like repeats. (187 aa)    
Predicted Functional Partners:
EDM43862.1
Beta-Ig-H3/fasciclin; COG2335 Secreted and surface protein containing fasciclin-like repeats.
  
     0.734
EDM43521.1
beta-Ig-H3/fasciclin; COG2335 Secreted and surface protein containing fasciclin-like repeats.
  
     0.651
EDM45216.1
Hypothetical protein.
       0.543
EDM45217.1
Putative transmembrane glycosyltransferase; COG1215 Glycosyltransferases, probably involved in cell wall biogenesis.
       0.503
EDM45218.1
COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
       0.503
EDM42911.1
Ferredoxin 2 with 4Fe-4S binding domain; COG1145 Ferredoxin.
    
   0.443
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.