Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM45227.1Hypothetical protein. (228 aa)    
Predicted Functional Partners:
EDM44245.1
Pyridine nucleotide-disulphide oxidoreductase domain protein; COG0348 Polyferredoxin.
  
     0.640
EDM43541.1
COG1396 Predicted transcriptional regulators.
  
     0.631
EDM43577.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
     0.617
EDM44026.1
Hypothetical protein.
  
     0.579
EDM45055.1
Hypothetical protein.
  
     0.571
EDM43058.1
Hypothetical protein.
  
     0.550
EDM45329.1
Hypothetical protein.
  
     0.541
EDM45226.1
Methyltransferase type 12; COG0500 SAM-dependent methyltransferases.
       0.532
EDM44580.1
Hypothetical protein.
  
     0.528
EDM44527.1
Hypothetical protein; COG1061 DNA or RNA helicases of superfamily II.
  
     0.520
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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