STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM44170.1Hypothetical protein; COG0364 Glucose-6-phosphate 1-dehydrogenase. (417 aa)    
Predicted Functional Partners:
EDM44265.1
Gliding motility-related protein.
  
 
   0.953
EDM45258.1
Gliding motility-related protein; COG0457 FOG: TPR repeat.
  
     0.770
EDM43750.1
Gliding motility protein.
  
     0.770
EDM43268.1
Hypothetical protein.
  
     0.769
EDM44223.1
Hypothetical protein; COG2067 Long-chain fatty acid transport protein.
  
   
 0.763
EDM44225.1
Possible gliding motility-related protein; possible serine kinase.
  
     0.760
EDM43782.1
PorT-related protein.
  
     0.758
EDM45644.1
Possible gliding motility-related protein.
  
     0.757
EDM42915.1
Possible gliding motility-related protein; possible serine kinase.
  
     0.754
EDM44977.1
Lipoprotein, putative.
  
     0.732
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.