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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM44217.1COG0836 Mannose-1-phosphate guanylyltransferase. (361 aa)    
Predicted Functional Partners:
EDM43306.1
COG1482 Phosphomannose isomerase.
 
 0.962
EDM44216.1
COG1808 Predicted membrane protein.
       0.792
EDM44218.1
COG3091 Uncharacterized protein conserved in bacteria.
       0.792
EDM44219.1
3-oxoacyl-(acyl-carrier protein) reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.775
EDM43432.1
Putative phosphoglucomutase/phosphomannomutase family protein; COG1109 Phosphomannomutase.
 
 
 0.770
pgi
COG0166 Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.733
EDM43003.1
Putative EPS related membrane protein; COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
 
 
 0.725
EDM43212.1
COG1109 Phosphomannomutase.
 
 
 0.704
EDM42983.1
Tyrosine-protein kinase; COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
  
 
 0.684
fbp
COG0158 Fructose-1,6-bisphosphatase; Belongs to the FBPase class 1 family.
   
 0.676
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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