STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM44231.1COG3222 Uncharacterized protein conserved in bacteria. (240 aa)    
Predicted Functional Partners:
EDM44230.1
Hypothetical protein; COG0535 Predicted Fe-S oxidoreductases.
 
     0.948
EDM44229.1
Hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
 
     0.822
EDM44242.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
     0.803
EDM44241.1
Hypothetical protein.
 
     0.734
EDM44232.1
Putative outer membrane protein, probably involved in nutrient binding; COG4771 Outer membrane receptor for ferrienterochelin and colicins.
 
     0.693
EDM44234.1
Hypothetical protein; COG0591 Na+/proline symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.672
EDM44233.1
Hypothetical protein.
 
     0.626
EDM44235.1
COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases.
 
     0.597
EDM44240.1
Hypothetical protein; COG3000 Sterol desaturase.
 
     0.551
EDM43637.1
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
  
     0.484
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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