STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM44241.1Hypothetical protein. (251 aa)    
Predicted Functional Partners:
EDM44242.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
     0.865
EDM44237.1
COG3222 Uncharacterized protein conserved in bacteria.
 
     0.862
EDM44240.1
Hypothetical protein; COG3000 Sterol desaturase.
 
     0.857
EDM45380.1
Polyunsaturated fatty acid synthase PfaA; COG3321 Polyketide synthase modules and related proteins.
     
  0.805
EDM44231.1
COG3222 Uncharacterized protein conserved in bacteria.
 
     0.734
EDM43637.1
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
  
     0.705
EDM44244.1
NADH oxidase, putative; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
 
     0.653
EDM44236.1
Hypothetical protein; COG0607 Rhodanese-related sulfurtransferase.
 
     0.646
EDM45556.1
Gamma-glutamyl carboxylase-like protein.
     
  0.565
EDM44243.1
Hypothetical protein.
  
     0.555
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.