STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM44241.1Hypothetical protein. (251 aa)    
Predicted Functional Partners:
EDM44240.1
Hypothetical protein; COG3000 Sterol desaturase.
 
     0.856
EDM44242.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
     0.853
EDM44237.1
COG3222 Uncharacterized protein conserved in bacteria.
 
     0.850
EDM44231.1
COG3222 Uncharacterized protein conserved in bacteria.
 
     0.734
EDM43637.1
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
  
     0.705
EDM44244.1
NADH oxidase, putative; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
 
     0.647
EDM44236.1
Hypothetical protein; COG0607 Rhodanese-related sulfurtransferase.
 
     0.625
EDM44243.1
Hypothetical protein.
  
     0.555
EDM44246.1
Glycosyl transferase, group 2 family protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
     0.536
EDM44245.1
Pyridine nucleotide-disulphide oxidoreductase domain protein; COG0348 Polyferredoxin.
  
     0.530
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.