STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM44247.1COG1215 Glycosyltransferases, probably involved in cell wall biogenesis. (496 aa)    
Predicted Functional Partners:
EDM44246.1
Glycosyl transferase, group 2 family protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
  
  0.932
EDM44244.1
NADH oxidase, putative; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
 
    0.851
EDM44245.1
Pyridine nucleotide-disulphide oxidoreductase domain protein; COG0348 Polyferredoxin.
 
     0.802
EDM43637.1
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
 
  
  0.794
EDM44243.1
Hypothetical protein.
 
 
  0.767
EDM44240.1
Hypothetical protein; COG3000 Sterol desaturase.
  
  
  0.665
EDM43338.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
 0.660
EDM42919.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
 0.639
EDM44781.1
COG0457 FOG: TPR repeat.
  
  0.588
EDM43992.1
Tetratricopeptide repeat family protein; COG0457 FOG: TPR repeat.
  
 0.567
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.