STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM44262.1TonB; COG0810 Periplasmic protein TonB, links inner and outer membranes. (241 aa)    
Predicted Functional Partners:
EDM45057.1
TPR domain protein; COG0457 FOG: TPR repeat.
  
     0.773
EDM44096.1
Hypothetical protein.
  
     0.773
EDM45347.1
Hypothetical protein.
  
     0.768
EDM45609.1
Hypothetical protein.
  
     0.766
EDM45610.1
Hypothetical protein; COG0206 Cell division GTPase.
  
     0.754
EDM45062.1
Hypothetical protein; COG2931 RTX toxins and related Ca2+-binding proteins.
  
  
  0.747
EDM43010.1
Hypothetical protein; COG2214 DnaJ-class molecular chaperone.
  
     0.745
EDM45216.1
Hypothetical protein.
  
     0.729
EDM43163.1
Hypothetical protein; COG0760 Parvulin-like peptidyl-prolyl isomerase.
  
     0.716
EDM43035.1
Hypothetical protein.
  
     0.703
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.