STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM44272.1Lysyl endopeptidase precursor. (544 aa)    
Predicted Functional Partners:
EDM44183.1
COG3210 Large exoproteins involved in heme utilization or adhesion.
 
     0.667
EDM44182.1
Hypothetical protein.
 
     0.665
EDM44147.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
     0.616
EDM43051.1
FG-GAP repeat protein.
  
     0.570
EDM44888.1
Hypothetical protein.
  
     0.528
EDM45423.1
Regulatory P domain of the subtilisin-like proprotein convertases and other protease; COG1404 Subtilisin-like serine proteases.
  
     0.515
EDM44346.1
Hypothetical protein.
  
     0.502
EDM44214.1
COG5651 PPE-repeat proteins.
  
     0.477
EDM45241.1
Hypothetical protein.
  
     0.475
EDM44179.1
Hypothetical protein.
  
     0.472
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.