STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM44295.1Lipase (putative secreted protein); COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases. (364 aa)    
Predicted Functional Partners:
EDM44888.1
Hypothetical protein.
  
     0.754
EDM43809.1
Putative outer membrane receptor protein.
  
     0.754
EDM43810.1
Putative outer membrane protein probably involved in nutrient binding; COG3210 Large exoproteins involved in heme utilization or adhesion.
  
     0.746
EDM44647.1
COG1250 3-hydroxyacyl-CoA dehydrogenase.
   
 
 0.696
EDM44504.1
COG1454 Alcohol dehydrogenase, class IV.
  
 
 0.692
EDM43883.1
Hypothetical protein.
  
     0.633
EDM43243.1
CHU large protein; uncharacterized.
  
     0.630
EDM45497.1
Thermolysin; COG3227 Zinc metalloprotease (elastase).
    
  0.624
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
       0.606
EDM43250.1
Hypothetical protein.
  
  
  0.600
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.