STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM44309.1Glycogen synthase-related protein; COG0297 Glycogen synthase. (273 aa)    
Predicted Functional Partners:
EDM44310.1
Hypothetical protein.
       0.809
glmS
Glutamine--fructose-6-phosphate transaminase, isomerizing; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
       0.796
EDM44504.1
COG1454 Alcohol dehydrogenase, class IV.
   
    0.619
panC
Putative pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
  
    0.616
EDM43432.1
Putative phosphoglucomutase/phosphomannomutase family protein; COG1109 Phosphomannomutase.
  
 
 0.593
EDM43212.1
COG1109 Phosphomannomutase.
  
 
 0.593
EDM44711.1
UDP-N-acetylglucosamine pyrophosphorylase related protein; COG1213 Predicted sugar nucleotidyltransferases.
     
  0.541
EDM44101.1
Hypothetical protein.
    
  0.537
EDM42975.1
Hypothetical protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
     
 0.529
EDM45271.1
Glucose-1-phosphate thymidyltransferase; COG1209 dTDP-glucose pyrophosphorylase.
    
  0.521
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.