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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM44313.1Glucose-methanol-choline oxidoreductase; COG2303 Choline dehydrogenase and related flavoproteins. (501 aa)    
Predicted Functional Partners:
EDM44461.1
GGDEF domain protein; COG3292 Predicted periplasmic ligand-binding sensor domain.
    
 0.961
EDM43586.1
phenylacetate-CoA oxygenase, PaaK subunit; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
 
  
 0.804
EDM45257.1
Ferredoxin; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
 
  
 0.798
EDM43448.1
Major anaerobically induced transmembrane protein; COG2010 Cytochrome c, mono- and diheme variants.
   
  0.781
EDM44276.1
Cytochrome c family protein; COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin.
   
  0.781
EDM44277.1
Hypothetical protein.
   
  0.781
EDM43615.1
COG3979 Uncharacterized protein contain chitin-binding domain type 3.
   
  0.781
EDM43710.1
COG2010 Cytochrome c, mono- and diheme variants.
   
  0.781
EDM43711.1
Hypothetical protein.
   
  0.781
EDM45097.1
Hypothetical protein.
    
 0.776
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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