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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM44332.1Amidase-type enzyme; COG0388 Predicted amidohydrolase. (258 aa)    
Predicted Functional Partners:
EDM44333.1
Ankyrin; COG0666 FOG: Ankyrin repeat.
   
  0.824
EDM44335.1
Putative aminotransferase; COG0436 Aspartate/tyrosine/aromatic aminotransferase.
 
 
 0.760
EDM44267.1
COG0281 Malic enzyme.
    
  0.661
EDM42924.1
Ferredoxin-dependent glutamate synthase; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases.
  
 
  0.626
purL
Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
  
 
 0.624
EDM44321.1
Hypothetical protein; COG0421 Spermidine synthase.
  
 
 0.593
EDM45131.1
COG0739 Membrane proteins related to metalloendopeptidases.
 
 
 0.590
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
   
  0.589
EDM43646.1
COG2957 Peptidylarginine deiminase and related enzymes; Belongs to the agmatine deiminase family.
  
 
 0.589
def
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.
      0.584
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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