STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM44357.1COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases. (242 aa)    
Predicted Functional Partners:
EDM44356.1
Hypothetical protein.
       0.773
EDM44358.1
COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase.
       0.773
EDM44355.1
Putative carboxypeptidase; COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF.
       0.701
EDM44354.1
Hypothetical protein; COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase; Belongs to the UPF0102 family.
       0.546
EDM45673.1
Hypothetical protein.
  
     0.513
EDM44359.1
COG4260 Putative virion core protein (lumpy skin disease virus).
       0.477
EDM45330.1
Hypothetical protein; COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1.
  
     0.446
EDM44722.1
Hypothetical protein; COG0497 ATPase involved in DNA repair.
  
     0.421
EDM45611.1
Hypothetical protein.
  
     0.404
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.