STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM44366.1COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain. (325 aa)    
Predicted Functional Partners:
EDM44367.1
Hypothetical protein; COG0457 FOG: TPR repeat.
     0.993
EDM44368.1
batD protein.
   
 0.973
EDM44369.1
Aerotolerance-related exported protein; COG0457 FOG: TPR repeat.
 
     0.947
EDM44362.1
Hypothetical protein; COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain).
 
    0.905
EDM44363.1
Hypothetical protein; COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain).
 
    0.905
EDM44365.1
Aerotolerance-related membrane protein; COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain.
 
 
 
0.873
EDM44364.1
Hypothetical protein; COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog).
 
     0.866
EDM44663.1
COG1239 Mg-chelatase subunit ChlI.
  
 0.789
guaA
Bifunctional GMP synthase/glutamine amidotransferase protein; Catalyzes the synthesis of GMP from XMP.
    
  0.729
EDM44361.1
Putative magnesium chelatase; COG0714 MoxR-like ATPases.
 
 
  0.718
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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