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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nadDNicotinic acid mononucleotide adenyltransferase. (307 aa)    
Predicted Functional Partners:
EDM43358.1
Hypothetical protein.
  
     0.725
EDM45130.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
  
     0.679
EDM43273.1
Hypothetical protein.
  
     0.638
EDM43573.1
Hypothetical protein.
  
     0.610
EDM44114.1
Hypothetical protein.
  
     0.589
EDM42827.1
Hypothetical protein.
  
     0.576
EDM44733.1
Putative outer membrane protein probably involved in nutrient binding; COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.563
EDM44535.1
Hypothetical protein.
  
     0.561
EDM45467.1
COG3210 Large exoproteins involved in heme utilization or adhesion.
  
     0.558
EDM44531.1
Hypothetical protein.
  
     0.547
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.