STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM44382.1Hypothetical protein; COG5658 Predicted integral membrane protein. (134 aa)    
Predicted Functional Partners:
EDM44383.1
Hypothetical protein; COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold.
       0.773
EDM44384.1
COG1309 Transcriptional regulator.
       0.554
EDM44381.1
Hypothetical protein; COG1561 Uncharacterized stress-induced protein.
       0.504
EDM44385.1
COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
    0.465
EDM44305.1
Hypothetical protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
  
     0.428
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.