STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM44387.1Regulatory P domain of the subtilisin-like proprotein convertases and other protease. (258 aa)    
Predicted Functional Partners:
EDM45003.1
COG2365 Protein tyrosine/serine phosphatase.
   
 
 0.997
EDM43243.1
CHU large protein; uncharacterized.
 
  
  0.862
EDM43445.1
Hypothetical protein.
    
 0.859
EDM44461.1
GGDEF domain protein; COG3292 Predicted periplasmic ligand-binding sensor domain.
  
 
 0.832
EDM44372.1
Sulfate transporter/antisigma-factor antagonist STAS; COG0659 Sulfate permease and related transporters (MFS superfamily).
    
   0.731
EDM44061.1
COG0659 Sulfate permease and related transporters (MFS superfamily).
    
   0.731
EDM44600.1
Possible integral membrane sulfate transportor; COG0659 Sulfate permease and related transporters (MFS superfamily).
    
   0.731
EDM44930.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
 0.697
EDM43475.1
Putative exported serine protease, subtilase family protein; COG1404 Subtilisin-like serine proteases.
  
 0.696
secY
Protein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.
    
   0.694
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.