STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM44390.1Hypothetical protein. (254 aa)    
Predicted Functional Partners:
EDM44389.1
Hypothetical protein; COG1393 Arsenate reductase and related proteins, glutaredoxin family; Belongs to the ArsC family.
       0.635
EDM43660.1
Hypothetical protein.
  
     0.588
EDM44388.1
Hypothetical protein; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.
       0.576
EDM42827.1
Hypothetical protein.
  
     0.544
EDM45278.1
Hypothetical protein; COG0419 ATPase involved in DNA repair.
  
     0.518
EDM44391.1
Cys/Met metabolism PLP-dependent enzyme superfamily protein; COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases.
       0.492
EDM44531.1
Hypothetical protein.
  
     0.486
EDM43079.1
Hypothetical protein; COG1452 Organic solvent tolerance protein OstA.
  
     0.469
EDM43273.1
Hypothetical protein.
  
     0.413
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.