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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM44399.1Histidine kinase DhkJ; COG3292 Predicted periplasmic ligand-binding sensor domain. (1008 aa)    
Predicted Functional Partners:
EDM44398.1
COG3279 Response regulator of the LytR/AlgR family.
 
  0.945
EDM45686.1
COG3279 Response regulator of the LytR/AlgR family.
 
  0.889
EDM43205.1
Two-component system response regulator protein; COG3279 Response regulator of the LytR/AlgR family.
 
  0.877
EDM44458.1
COG3279 Response regulator of the LytR/AlgR family.
 
  0.874
EDM44677.1
COG3279 Response regulator of the LytR/AlgR family.
 
  0.852
EDM44134.1
Putative two-component system response regulator; COG3279 Response regulator of the LytR/AlgR family.
 
  0.812
EDM42858.1
COG3279 Response regulator of the LytR/AlgR family.
 
  0.745
EDM44292.1
Transcriptional regulator; COG0784 FOG: CheY-like receiver.
 
  0.731
EDM44402.1
COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain.
 
     0.660
EDM42926.1
Transcriptional regulator, Crp/Fnr family protein; COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.
  
 
   0.637
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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