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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kbl2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. (397 aa)    
Predicted Functional Partners:
EDM45376.1
NAD dependent epimerase/dehydratase; COG0451 Nucleoside-diphosphate-sugar epimerases.
 
 
  0.801
EDM45380.1
Polyunsaturated fatty acid synthase PfaA; COG3321 Polyketide synthase modules and related proteins.
 
 
 0.780
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
 
 0.771
EDM44445.1
COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); Belongs to the helicase family. UvrD subfamily.
       0.753
EDM45221.1
COG0642 Signal transduction histidine kinase.
  
 
 0.669
EDM44338.1
Histidine kinase; COG0642 Signal transduction histidine kinase.
  
 
 0.661
EDM45534.1
Hybrid sensory kinase; COG0642 Signal transduction histidine kinase.
  
 
 0.661
EDM43866.1
Two-component system sensor histidine kinase; COG0642 Signal transduction histidine kinase.
  
 
 0.661
EDM44035.1
2-amino-3-ketobutyrate CoA ligase (glycine acetyltransferase); COG0156 7-keto-8-aminopelargonate synthetase and related enzymes.
  
  
 
0.648
gcvT-2
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine.
  
 
 0.642
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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