Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM45247.1Hypothetical protein. (311 aa)    
Predicted Functional Partners:
EDM43766.1
Cell division protein FtsQ.
  
 
 0.871
ftsA
Cell division protein A; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
   
 0.865
EDM44984.1
Hypothetical protein.
  
     0.760
EDM45258.1
Gliding motility-related protein; COG0457 FOG: TPR repeat.
  
     0.743
EDM43116.1
Hypothetical protein.
  
  
  0.742
EDM44690.1
COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1.
  
     0.726
EDM45683.1
Hypothetical protein.
  
     0.716
infB
Translation initiation factor IF-2; COG0457 FOG: TPR repeat.
  
     0.710
EDM43086.1
B-glycosidase, glycoside hydrolase family 3 protein; COG1472 Beta-glucosidase-related glycosidases.
 
  
  0.710
EDM45553.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
     0.707
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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