STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM45251.1COG1272 Predicted membrane protein, hemolysin III homolog. (270 aa)    
Predicted Functional Partners:
EDM45250.1
Hypothetical protein.
 
     0.886
EDM45253.1
Site-specific DNA-methyltransferase (adenine-specific); COG3392 Adenine-specific DNA methylase.
 
     0.806
EDM45254.1
Hypothetical protein.
       0.794
EDM45252.1
Hypothetical protein.
       0.773
EDM43660.1
Hypothetical protein.
  
     0.770
EDM43305.1
Hypothetical protein; COG1193 Mismatch repair ATPase (MutS family).
  
     0.769
EDM44304.1
COG2819 Predicted hydrolase of the alpha/beta superfamily.
  
     0.764
EDM43524.1
Fructose-6-phosphate aldolase 2; COG1225 Peroxiredoxin.
  
     0.763
EDM43424.1
Hypothetical protein; COG2388 Predicted acetyltransferase.
  
     0.762
EDM44037.1
Hypothetical protein.
  
     0.761
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.