STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM45253.1Site-specific DNA-methyltransferase (adenine-specific); COG3392 Adenine-specific DNA methylase. (339 aa)    
Predicted Functional Partners:
EDM45251.1
COG1272 Predicted membrane protein, hemolysin III homolog.
 
     0.806
EDM45252.1
Hypothetical protein.
       0.786
EDM45254.1
Hypothetical protein.
       0.775
EDM43796.1
COG2003 DNA repair proteins; Belongs to the UPF0758 family.
 
      0.738
EDM45255.1
Heptosyltransferase; COG0859 ADP-heptose:LPS heptosyltransferase.
       0.523
EDM45250.1
Hypothetical protein.
       0.511
EDM43005.1
Hypothetical protein.
  
     0.470
EDM45256.1
Heptosyltransferase; COG0859 ADP-heptose:LPS heptosyltransferase.
       0.425
Your Current Organism:
unidentified eubacterium SCB49
NCBI taxonomy Id: 50743
Other names: u. eubacterium SCB49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.